Hi ByteJunki,
reimaged the micro SD card
editted config.txt to enable the HifiBerry Amp
booted the Pi
ssh'd into it,
pulled latest from git.
For me, this works perfect.
The git pull can't be the problem, because it only changes files in /var/www.
One reason can be a corrupted config.txt.
So please try one step at a time. First enable HifiBerry Amp and check if this works.
Next do a git pull and check this.
Frank